BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005D11SP1|AL425373
(990 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1647 1922 0.0
>3x_Contig1647
Length = 14353
Score = 1922 bits (969), Expect = 0.0
Identities = 986/991 (99%), Gaps = 1/991 (0%)
Strand = Plus / Minus
Query: 1 cgtgttattccgttattctttatcagtacagcgttttcatttcctattgaatgcttctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5837 cgtgttattccgttattctttatcagtacagcgttttcatttcctattgaatgcttctgt 5778
Query: 61 caagctctagcttcttttattcgatgccccaagtcccgagaaacctgcatgcgatcaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5777 caagctctagcttcttttattcgatgccccaagtcccgagaaacctgcatgcgatcaatg 5718
Query: 121 acacgggtcatagttcttccgataacaaaggtagtatacatttctgtccgtcactagtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5717 acacgggtcatagttcttccgataacaaaggtagtatacatttctgtccgtcactagtaa 5658
Query: 181 atattagtatagtccgacataatgatcccacattggggaattatcttgagatcggaattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5657 atattagtatagtccgacataatgatcccacattggggaattatcttgagatcggaattc 5598
Query: 241 taagtgattttgcggaggactcgcgccttgaatgattggcgatttcttgggggccagaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5597 taagtgattttgcggaggactcgcgccttgaatgattggcgatttcttgggggccagaag 5538
Query: 301 ttgggttgtaggctggtttagcaaaagtctttgtagtatcaaggtcaggccgtgcaaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5537 ttgggttgtaggctggtttagcaaaagtctttgtagtatcaaggtcaggccgtgcaaggg 5478
Query: 361 ttacttcagactggcgtctcaacaattcagggtcatcgacaaaaatcaaaaacgctgtca 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5477 ttacttcagactggcgtctcaacaattcagggtcatcgacaattttcaaaaacgctgtca 5418
Query: 421 tcagacaggctccgatacataatactaagggaatgtacacgaaaaataaggggtccaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5417 tcagacaggctccgatacataatactaagggaatgtacacgaaaaataaggggtccaaat 5358
Query: 481 tcactgttctcgaatacaatttcaaaaataacgatggcattaccatcattgcacaacttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5357 tcactgttctcgaatacaatttcaaaaataacgatggcattaccatcattgcacaacttc 5298
Query: 541 taattaatgccattgcaccaaataactcacctgtagaacttttcgatccgtatttgataa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5297 taattaatgccattgcaccaaataactcacctgtagaacttttcgatccgtatttgataa 5238
Query: 601 ctgtggattgcactgttggggatagcatgcttcccagtatttgtaggagaacgtatacgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5237 ctgtggattgcactgttggggatagcatgcttcccagtatttgtaggagaacgtatacgt 5178
Query: 661 atgcagcggattcacttcgactaatcactaatactactagcgaaagtagaataaaaaagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5177 atgcagcggattcacttcgactaatcactaatactactagcgaaagtagaataaaaaagg 5118
Query: 721 aagaaacacgtagtacaaccatgtctgtgtggtccacagattttgataacgttttgaatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5117 aagaaacacgtagtacaaccatgtctgtgtggtccacagattttgataacgttttgaatc 5058
Query: 781 gtttcttcaaaagatgtagtgccagcggtgcgagaactaataaagcagcagccttgccga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5057 gtttcttcaaaagatgtagtgccagcggtgcgagaactaataaagcagcagccttgccga 4998
Query: 841 gtcccattaaagacacaaagtaacctaattgctctgaactccaaccgaacatgaaaacaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4997 gtcccattaaagacacaaagtaacctaattgctctgaactccaaccgaacatgaaaacaa 4938
Query: 901 aggctaaaacaatcgccggtatagatgccgctgtagatatgacaaacatgatatctatt- 959
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4937 aggctaaaacaatcgccggtatagatgccgctgtagatatgacaaacatgatatctattc 4878
Query: 960 cmacaagcaataaaaccatgtatcttggaac 990
| |||||||||||||||||||||||||||||
Sbjct: 4877 caacaagcaataaaaccatgtatcttggaac 4847
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6190
Number of Sequences: 1807
Number of extensions: 6190
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 990
length of database: 10,358,551
effective HSP length: 16
effective length of query: 974
effective length of database: 10,329,639
effective search space: 10061068386
effective search space used: 10061068386
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)